IF you have carried out the mods AFTER the mapping then you need a remap on a dyno/rolling road so the problem will occur to see if it is a fuel or ignition fault.
IF it is fuel related it will show in the Air Fuel Ratio leaning out provided there is a sniffer in the exhaust pipe.
RULE NO 1 always do power upgrade mods BEFORE
retune/remap NOT AFTER
All trouble shooting is a process of elimination so here is the way I would attack your problem IF YOU HAVE RULED OUT ANY IGNITION FAULTS as per T9's recommendations.
From your description It sounds like it may be fuel starvation to me so I would,
1 partly drain fuel tank to check for water or contamination
2 remove the in tank fuel pick up/pump to check for blockage
3 disconnect fuel filter and pressure blast lines in both directions and install new filter
4 have injectors flow tested to eliminate possible blocked pintles that can restrict fuel supply at higher revs
5 clean/replace air filter if needed
PS I had the exact same problem many years ago when on the way to an event I filled up at a small country servo and got a tank or poor fuel and had to do exactly what I have recommended for you.